Scaffold FACEMD_FWMYIUC02F478C

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FACEMD_FWMYIUC02F478C

Scaffold FACEMD_FWMYIUC02F478C

Overview

Basic Information
Taxon OID	2032320004 Open in IMG/M
Scaffold ID	FACEMD_FWMYIUC02F478C Open in IMG/M
Source Dataset Name	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2-
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	503
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location
Location Name	Maryland Wetland Ecosystem, MD
Coordinates	Lat. (^o)	38.85	Long. (^o)	-76.53333	Alt. (m)		Depth (m)	.01
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F031579	Metagenome / Metatranscriptome	182	Y

Sequences

Protein ID	Family	RBS	Sequence
FACEMDA_1824720	F031579	N/A	EDPIARLRPIQNTDRFELFYWSNVKERWTMFENLGRMKLMLESAHEIVENDPMFRVPRSR

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