Scaffold FACEOR_FYWIORV02ITNO2

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FACEOR_FYWIORV02ITNO2

Scaffold FACEOR_FYWIORV02ITNO2

Overview

Basic Information
Taxon OID	2032320006 Open in IMG/M
Scaffold ID	FACEOR_FYWIORV02ITNO2 Open in IMG/M
Source Dataset Name	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	505
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location
Location Name	Oak Ridge Integrated Field Research Center, Tennessee, USA
Coordinates	Lat. (^o)	35.94106884	Long. (^o)	-84.4	Alt. (m)		Depth (m)	.05
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F062041	Metagenome	131	Y

Sequences

Protein ID	Family	RBS	Sequence
FACEORE_3986660	F062041	N/A	RIRAARRAEIWEHHVRPLALTMMLLGPGLGLGMSTLLGALGMGALGDAMGTQAGAETLAATMASAYREISYAYFLMVGGTFPMLLGPVIVLAARRLDFDAVDARGGDPDEVLLLTLKSLLAVTESQAQRLQSDAAKTHALLEATAAALSRGRAA

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