Basic Information | |
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Taxon OID | 2088090008 Open in IMG/M |
Scaffold ID | P3_DRAFT_NODE_12486_len_7875_cov_20_484571 Open in IMG/M |
Source Dataset Name | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7925 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (71.43%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil → Soil Microbial Communities From Permafrost In Bonanza Creek, Alaska |
Source Dataset Sampling Location | ||||||||
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Location Name | Bonanza creek, Alaska, USA | |||||||
Coordinates | Lat. (o) | 64.7 | Long. (o) | -148.3 | Alt. (m) | Depth (m) | .3 to .7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F104013 | Metagenome / Metatranscriptome | 101 | Y |
Protein ID | Family | RBS | Sequence |
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P3_DRAFT_00217850 | F104013 | GGA | MGSGLIQRDLVPGGIRLSPAPGAAAALVELVDLERECCAWIHFEGSDGSTVTLTAEGDGEATLVGMFVETH |
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