Basic Information | |
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Taxon OID | 2199352018 Open in IMG/M |
Scaffold ID | QLA_contig08320.8320 Open in IMG/M |
Source Dataset Name | Saline water microbial communities from Qinghai Lake, Tibetan Plateau -Sample 11630 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Illinois, Urbana-Champaign |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1162 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water → Saline Water Microbial Communities From A Tibetan Plateau Lake |
Source Dataset Sampling Location | ||||||||
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Location Name | Qinghai Lake, Tibetan Plateau | |||||||
Coordinates | Lat. (o) | 36.381 | Long. (o) | 100.218 | Alt. (m) | Depth (m) | 1 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F063412 | Metagenome / Metatranscriptome | 129 | Y |
Protein ID | Family | RBS | Sequence |
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QLA_00325520 | F063412 | GGTGG | VLETKLSLRETLRLLSSVEKPVMSRFWFGSPCRFVRQVDVLTHIVVPELLEGRLPRLAKYLRRTSPRWGRSWRNWSSETLGPDVEARQVD |
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