Basic Information | |
---|---|
Taxon OID | 3300000117 Open in IMG/M |
Scaffold ID | DelMOWin2010_c10037341 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 2287 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine → Marine Microbial Communities From Delaware Coast |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Microbial Observatory off the coast of Delaware, USA | |||||||
Coordinates | Lat. (o) | 38.84917 | Long. (o) | -75.1076 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F069049 | Metagenome | 124 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
DelMOWin2010_100373415 | F069049 | AGG | MAPTYNYQASHLQSFQHALKAGEEFEQKVIKLLKKAGHEAWKSKDRSYDLDVALDVPLYGAHRITAECKMDFMASTSGNLALEVLSGGKPSGIHPHGPSPDLWCHGIDNEVWLMKTRAIQDLCVMHRMTWGNKYVPVGDKFMKAQAILMPITVARKAVGGAWVKL* |
⦗Top⦘ |