Basic Information | |
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Taxon OID | 3300000199 Open in IMG/M |
Scaffold ID | SI39nov09_10mDRAFT_c1006234 Open in IMG/M |
Source Dataset Name | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 39 11/10/09 10m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1134 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Saanich Inlet 39, Vancouver Island, BC, Canada | |||||||
Coordinates | Lat. (o) | 48.35 | Long. (o) | -123.29 | Alt. (m) | Depth (m) | 10 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F017147 | Metagenome / Metatranscriptome | 242 | N |
Protein ID | Family | RBS | Sequence |
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SI39nov09_10mDRAFT_10062342 | F017147 | N/A | MHNWKHFYKHKQGLAVANMLYQPLVNEDNTVFCMNWNPNDYFENESMNEELYNFWFDQEVMYLSKLKDTKYIPELLDIDYAKREIKFKWYNKNLNVLIENNQIDSIPNWKEKIKQIKQDLEQQNIYKINMYPHTFYFDDNNEAHCMDLYGCTDNDNRYLDIKYLKPLIRTDRFDKFILNNQLDTHELYKETIKTNYAEWPGDFLNA* |
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