Basic Information | |
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Taxon OID | 3300000295 Open in IMG/M |
Scaffold ID | EM334_1068126 Open in IMG/M |
Source Dataset Name | Human fecal microbial communities from Cork, Ireland - EM334 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Genomics Institute (BGI), Macrogen |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1375 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From University College Cork, Ireland, Of The Elderly Irish Population |
Source Dataset Sampling Location | ||||||||
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Location Name | Cork, Ireland | |||||||
Coordinates | Lat. (o) | 51.907 | Long. (o) | -8.472 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F071325 | Metagenome | 122 | N |
Protein ID | Family | RBS | Sequence |
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EM334_10681262 | F071325 | N/A | LRFHKFQYCSIFKVLLALLSDSSIIISKVVPFVKHFFDIFLSFPNAFLKAFHPHAVRFPAAFLLVHRFYLDFEELLSCATAYL* |
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