Scaffold OneHSP_7476CDRAFT_1003647

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold OneHSP_7476CDRAFT_1003647

Scaffold OneHSP_7476CDRAFT_1003647

Overview

Basic Information
Taxon OID	3300000342 Open in IMG/M
Scaffold ID	OneHSP_7476CDRAFT_1003647 Open in IMG/M
Source Dataset Name	Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA - T=74-76
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	2776
Total Scaffold Genes	11 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (36.36%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Korarchaeota → Candidatus Korarchaeota archaeon	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Ferrous Mat → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico

Source Dataset Sampling Location
Location Name	One Hundred Spring Plain, Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.7330426	Long. (^o)	-110.7089928	Alt. (m)		Depth (m)	2286
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F084460	Metagenome / Metatranscriptome	112	N

Sequences

Protein ID	Family	RBS	Sequence
OneHSP_7476CDRAFT_10036477	F084460	AGAAG	VSQINPDDLLKRIDEIVNKAIAKHLAEMSRQYTPQEINIKFTKNWILVFLPNGYLKISKKLSEGSYKLKILQYKEKK*

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