Basic Information | |
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Taxon OID | 3300001372 Open in IMG/M |
Scaffold ID | YBBDRAFT_1156042 Open in IMG/M |
Source Dataset Name | YB-Back-sed |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of South Carolina |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1333 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine → Marine And Estuarine Microbial Communities From Columbia River Coastal Margin |
Source Dataset Sampling Location | ||||||||
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Location Name | Youngs Bay mouth | |||||||
Coordinates | Lat. (o) | 46.15968 | Long. (o) | -123.80651 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F068264 | Metagenome / Metatranscriptome | 125 | Y |
Protein ID | Family | RBS | Sequence |
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YBBDRAFT_11560423 | F068264 | AGG | MKLNEITAEDVLAGKLWIIEPGQDGETNPTVKESVGFAGEDTGLISAVVRIADGSEHLGLVVKSFPQGGDDVDIYIKTNFGWLNIHANGFMRALGKYSHEIFPFDYFLSSPWKGGKQPEPDK |
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