Scaffold TahiMoana

Basic Information
Taxon OID	3300001679 Open in IMG/M
Scaffold ID	TahiMoana_1016116 Open in IMG/M
Source Dataset Name	Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300001679 Open in IMG/M

Scaffold ID

TahiMoana_1016116 Open in IMG/M

Source Dataset Name

Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	5605
Total Scaffold Genes	13 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (46.15%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (50.00%)
Associated Families	4

Scaffold Components

Scaffold Length (bps)

5605

Total Scaffold Genes

13 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

6 (46.15%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (50.00%)

Associated Families

Taxonomy
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → unclassified viruses → Circular genetic element sp.

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Ecosystem

Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Tahi Moana, Lau Basin, Pacific Ocean

Source Dataset Sampling Location
Location Name	Tahi Moana, Lau Basin, Pacific Ocean
Coordinates	Lat. (^o)	-20.682131	Long. (^o)	-176.183363	Alt. (m)	Depth (m)	2230
Location on Map

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Source Dataset Sampling Location

Location Name

Tahi Moana, Lau Basin, Pacific Ocean

Coordinates

Lat. (^o)

-20.682131

Long. (^o)

-176.183363

Alt. (m)

Depth (m)

2230

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F005319	Metagenome	405	Y
F005551	Metagenome	397	Y
F005580	Metagenome	396	Y
F010737	Metagenome	300	N

Family

Sequences

Protein ID	Family	RBS	Sequence
TahiMoana_10161161	F005319	N/A	MTDQQFLLIWIFSFFLYFAIYTIWIPLKTQKKIESWLKSAESDETLLMSLDVITKKIREQMLIDFEEFMLPQARESLQKFWSGAMGNAAKELKGSEEGSNLSLLHNITQDLSGQPWYVQALASKMLPMITEAVKTQPKRTSDAILGMGLQK*
TahiMoana_101611611	F005551	N/A	MTLAASKSVSRAKGGNIYGWSGSQALSASAVTLLSYTNPSAFYLTRITLGVDWTGISATEFISYTINVDGTALFVEKTIVTADNIGTQPKMFEFMIPPNSTVKVQALQSNSNGFITCILTGYRI*
TahiMoana_10161163	F005551	GAG	MTLGPSKSVSRAKDGKIYGWSGSYALTSSAVTLLDYTNPSAFYLTRVTLGIDWSSISAGEILSYTINVDDQPLFVEKLVVLINNIGIQPKMFEFIIPPNSTVKIQATESANNGSISCILTGYRV*
TahiMoana_10161165	F010737	N/A	MVTTITRTFDSTPTDKTYFSLTDNMSSSSLGNIQTPQGSQRISRIDVAVDAADTKGFVLACRLLGSNMSEQNLTLAGSCGDVADAGGTPQFNMIPTNFSVAGVNNIDLQVAFQFSSGTPTASSLSVTLYFE*
TahiMoana_10161166	F005580	AGGAG	MKAVPHPSITGMASGLAIAAYLNAGETVTGSFGKTSVTEGVIKDITDGQLGAAFNTLSGNAIDMIGSDAGRKTLVTASLVAMAGAFARSRFPQLKLGGSKLYFRI*
TahiMoana_10161169	F005319	AGGA	MTDAAFYLFALISFAIYFIIYTYYVPLKTQQKIESWLKSSESDKTLLMSLDVITKKIREQMLIDFEEFMLPQARESFQKFWTGAMGHAAKELKNSDQGNFSLMHSITKELENQPYYIQMLGAKLLPIITEAAKKQPIGKSVAEIGMGLGK*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold TahiMoana_1016116

Overview

Ecosystem & Geography

Associated Families

Sequences