Scaffold KiloMoana

Basic Information
Taxon OID	3300001680 Open in IMG/M
Scaffold ID	KiloMoana_10011207 Open in IMG/M
Source Dataset Name	Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300001680 Open in IMG/M

Scaffold ID

KiloMoana_10011207 Open in IMG/M

Source Dataset Name

Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	4700
Total Scaffold Genes	9 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	5 (55.56%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (40.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

4700

Total Scaffold Genes

9 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

5 (55.56%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (40.00%)

Associated Families

Taxonomy
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	(Source: UniRef50)

Taxonomy

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Kilo Moana, Pacific Ocean

Source Dataset Ecosystem

Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Kilo Moana, Pacific Ocean

Source Dataset Sampling Location
Location Name	Kilo Moana, Lau Basin, Pacific Ocean
Coordinates	Lat. (^o)	-20.054108	Long. (^o)	-176.133522	Alt. (m)	Depth (m)	2600
Location on Map

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Source Dataset Sampling Location

Location Name

Kilo Moana, Lau Basin, Pacific Ocean

Coordinates

Lat. (^o)

-20.054108

Long. (^o)

-176.133522

Alt. (m)

Depth (m)

2600

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000704	Metagenome	928	Y
F001606	Metagenome	664	N
F001712	Metagenome / Metatranscriptome	648	Y
F001922	Metagenome	617	Y
F022118	Metagenome	216	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
KiloMoana_100112072	F001922	GGA	MIQKLLVEEGMKRGLKASREYSVSVLGYDFIGLISRLAIFFITGFLINSYFQATIQGGIWLNSLAGFFGLNFPTTLPEWTTKLFTTGFHNITFWQIVQVISVLIVVMEYMQYDRMLKEKQEKPNITTGAVFAMIGLGLSLITFPQIIQKVKEMRILNES*
KiloMoana_100112074	F000704	N/A	MPHARSEIQPSNVKAIPTYGIDAYGEDLFLPFTDVGLTETALTFSTAVVTRDVEDSNQPMDDFPAVYSDTDAGLLLNEGNDTAFSQTYSFVPDMTAIIYAIHLVFPALVTCSAFTSGTLNVGALHIKITERSTNNRLLYENTFQSGAANLTATGTSLHFFQRDIVETIKVEKGNPIDILVELVTVITGTNTRQEGYCGLAPYLKTAVLKRFTPAGMALHLHADLSHADGVFKYKKDRVSLLGQ*
KiloMoana_100112075	F001606	GAGG	MTYGYDDVTTTSLGTGVAETQLNTATSLSAPDPAHAFLACIPYQSESAAFTVDQSLLTAFRIQSDDVAVEPKKFVLPNVNTGDASFTSVAAPALLAYPINTPLAGGEHLNFYGQPLVANAVAPICGATVIYDTESTNGAEQYYTRPTNESVAATAVDTRTEGGSMTIQGGNEITGLYTVVSGGVATASQHDVGYSEFLSPDFNTSMPYRVAIQPSYTGLGAAANAVTGGGGIMQYNMPRGKGIPLANNVTITNYYTNRDARTGASNFINFVRYSKN*
KiloMoana_100112076	F001712	N/A	LARRKGARTKTVTRRRRRLPSRKKVSKSIGSQWGKISKGAGVLAFLSNVTGSDMSASAGQPIGARAQNFGNSLLGRISGYTPFKNAAGANTPQTIGIDGIFNKWSGIGLASTVYGMLPLKMLPHKGKAKTLGKSLLTAGILSGIFMPTNTHSNLISSSPALTVSSSEVSYT*
KiloMoana_100112078	F022118	N/A	MITIPDFKCSKQSSHGREERIEFIISEVKKHPDFHFDGAAYTKEKCSDFASVDDLINLCLRMMHYAPQTRKDITEQILMELQII*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold KiloMoana_10011207

Overview

Ecosystem & Geography

Associated Families

Sequences