Basic Information | |
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Taxon OID | 3300001851 Open in IMG/M |
Scaffold ID | RCM31_10372488 Open in IMG/M |
Source Dataset Name | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 555 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton → Marine Plankton Microbial Communities From The Amazon River Plume, Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Afu?, Para, Brazil | |||||||
Coordinates | Lat. (o) | -0.156917 | Long. (o) | -50.62255 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F003126 | Metagenome / Metatranscriptome | 506 | Y |
Protein ID | Family | RBS | Sequence |
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RCM31_103724881 | F003126 | N/A | LRPVLKELANFPWIRLEAGCAGHKAEDTLWVEINVRGSSGLSRLSGYLRILDSKLSGTDCRVDCLLNQAADIDGPLVPHGWIPTTIEIIWPRTENWKRQQSMVIETMLSSIEEFSAKTAQPEQSNGAINYCPFCASSFIGVDTIEKSGPHRYRCGDCDMNWTMIDPAV* |
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