Scaffold M3t2BS2_1430810

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold M3t2BS2_1430810

Scaffold M3t2BS2_1430810

Overview

Basic Information
Taxon OID	3300002139 Open in IMG/M
Scaffold ID	M3t2BS2_1430810 Open in IMG/M
Source Dataset Name	M3t2BS2 (117f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	6351
Total Scaffold Genes	8 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	5 (62.50%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA044-N04	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name	Baltic Sea
Coordinates	Lat. (^o)	65.3915	Long. (^o)	23.49916667	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F042867	Metagenome / Metatranscriptome	157	Y

Sequences

Protein ID	Family	RBS	Sequence
M3t2BS2_14308108	F042867	N/A	ISMYGAVSDVAPRQVVTKFAVVQAGSAARAAVGIETTVIESSDETATSVKERLNLKVLMSYLVILSLALPDV*

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