Scaffold M2t2FKB2

Basic Information
Taxon OID	3300002140 Open in IMG/M
Scaffold ID	M2t2FKB2_1212825 Open in IMG/M
Source Dataset Name	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2FKB2 (112f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300002140 Open in IMG/M

Scaffold ID

M2t2FKB2_1212825 Open in IMG/M

Source Dataset Name

Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2FKB2 (112f)

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	2949
Total Scaffold Genes	11 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	10 (90.91%)
Novel Protein Genes	7 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	7 (100.00%)
Associated Families	7

Scaffold Components

Scaffold Length (bps)

2949

Total Scaffold Genes

11 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

10 (90.91%)

Novel Protein Genes

7 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

7 (100.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Taxonomy

All Organisms → Viruses → Predicted Viral

(Source: DeepVirFinder)

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Ecosystem

Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name	Baltic Sea
Coordinates	Lat. (^o)	57.305	Long. (^o)	20.0745	Alt. (m)	Depth (m)	1
Location on Map

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Source Dataset Sampling Location

Location Name

Baltic Sea

Coordinates

Lat. (^o)

57.305

Long. (^o)

20.0745

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007525	Metagenome / Metatranscriptome	349	Y
F030094	Metagenome / Metatranscriptome	186	Y
F070119	Metagenome	123	N
F071246	Metagenome	122	N
F072347	Metagenome	121	Y
F082675	Metagenome / Metatranscriptome	113	N
F093864	Metagenome / Metatranscriptome	106	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t2FKB2_121282510	F072347	AGGA	MDNRTKAEILVQFTQDNFNDEVYEDFFDYNDLGIPLSIAVMQEMVILTDKGEELLQETWKELCEVFGADPNGEYENIDDVTGV*
M2t2FKB2_12128252	F093864	GGAG	MYNYNVEFVLEAMVIITHVSFDEPDLSDEFIIEEARQNLLTNYKIDPETLYLQDVIVHEV
M2t2FKB2_12128253	F030094	AGGA	MKLRGIFEGTFESVWSMEVPQAEWDYYLEINSDFDENDRDDIQEMWEHFKSIGCYDECDDTADTSVVMTGIETYNVEVEVN*
M2t2FKB2_12128254	F082675	GAGG	MSKQYHWVVVYDEDWKCFMVDAEGEILDRDKMLYNKESGKWEYLEEDTEQEAEYYRLEEILAYQLTRLDLSEKV*
M2t2FKB2_12128255	F007525	AGTAGG	MKTLEGVTVTYKEVIPTSKQMAEFYVWQEGAESYATITYLDRTVEVERNGEMYLSIPDVSKNGLSEHYQNIVRYSDDLEAEGIKDDIQLTQFIKTISNSGYQVYHMNPWWETLPHNDHDMGDVYDTFYEAVEGGIEYIMEESNWED*
M2t2FKB2_12128257	F070119	GGAGG	MNLNSYKAFDFVIPNCLEPGDVIEWGEEIYTVKKFDLLSDGFIIYAVDEMEEDVELLIPDNIVLSLMEEQ*
M2t2FKB2_12128259	F071246	GGA	MGKSSNEKVADKIVALLADGRISQADWRLWIPRRITDHNKMIIANAKNFADGINEVIENEQIGISKELLFDYQTGKQNGQ*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold M2t2FKB2_1212825

Overview

Ecosystem & Geography

Associated Families

Sequences