Scaffold M1t2FKB2103N_1689424

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold M1t2FKB2103N_1689424

Scaffold M1t2FKB2103N_1689424

Overview

Basic Information
Taxon OID	3300002230 Open in IMG/M
Scaffold ID	M1t2FKB2103N_1689424 Open in IMG/M
Source Dataset Name	Marine microbial communities from the Baltic Sea - M1t2 FKB2 (103N)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Karolinska Institutet
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	606
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea Examining Degradability Of Arctic, Terrigenous Carbon Compounds In The Sea

Source Dataset Sampling Location
Location Name	Baltic Sea
Coordinates	Lat. (^o)	58.133	Long. (^o)	10.0	Alt. (m)		Depth (m)	1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F099294	Metagenome / Metatranscriptome	103	N

Sequences

Protein ID	Family	RBS	Sequence
M1t2FKB2103N_16894241	F099294	N/A	CDSYESSHRSMLDFIDPSWALIYSVDDVSQVEKDLQDNVLLGKISTTKLQQVLKKHPFIGQLPYSSEILIALPKAQDTANKVLVIAKSHKTTPQDSLQNTSPPKKGIVIKEYPGETIYQAQVGDYILLSGTKKYLEKALKQEKKQDLALVKLMGSNTFKGISVYTKYNTFLGSEATLSAWNGLDLTLVSKGIQGSGIAMIQD

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