Basic Information | |
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Taxon OID | 3300002245 Open in IMG/M |
Scaffold ID | JGIcombinedJ26739_100819405 Open in IMG/M |
Source Dataset Name | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 811 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Mammalia → Theria → Eutheria → Boreoeutheria → Euarchontoglires → Primates → Haplorrhini → Simiiformes → Catarrhini → Hominoidea → Hominidae → Homininae → Homo → Homo sapiens | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Multiple Locations In Canada And Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Algoma, Ontario, Canada | |||||||
Coordinates | Lat. (o) | 46.42 | Long. (o) | -83.37 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F017520 | Metagenome / Metatranscriptome | 240 | Y |
Protein ID | Family | RBS | Sequence |
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JGIcombinedJ26739_1008194051 | F017520 | N/A | MTSVLAQTPQLQTNVVYVCKDGQSFKVFSCDNTTGACDYQNYKNGQAYQRGEALRVQLAALLPAKCHAQTPAEAQADPHRGEVPPAPSPFKARASAASNGSGSPGAVNSQAGGGGFKVGDTVRVLSDGWQEGKIVQVHGVSYVVHLPNGVEVSKLWPTEVRRLGKLTAEDHAMGQYDLHDRVQVLVNGRWMEGEIRGQNLNMYDIKVRGVDTGFGSDIVNTTPENIRMSTTPAPAAPAQRAAGQVPKPGLTSCAGKYEGRWEHVSGMGG |
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