Basic Information | |
---|---|
Taxon OID | 3300002483 Open in IMG/M |
Scaffold ID | JGI25132J35274_1010330 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Pacific Ocean - ETNP_6_30 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 2295 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium paraoxydans | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Pacific Ocean | |||||||
Coordinates | Lat. (o) | 18.92 | Long. (o) | -104.89 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F047370 | Metagenome | 150 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
JGI25132J35274_10103301 | F047370 | N/A | IARDKGLPLPMVMTAQEGTGLLGGFANKFFKVLGIMPFINGIGREALQGAEQKAGREYLNNSVLNYGPLIKTGMLSATIWKQADQAFKQNSNLINASYRAFDTLADTIGNPKVIPTNHVKKMAKERVDEIAMQFPGIRSYAQDALGNIDMKEIAKLQGTGDPLALFFRYMNSIDDFVTPKEYKGMIQTLNRAIEGTSYQNIRPTLWSIREALENDLNSFGANITKETFLKDETVKASYDALAKTNKALADSNIDMMVKQSEQLKDKLYGANDTFSTLMNFYQDANITKIFRDYNATTFTNKALAGIGGMQKKKAQRFFNDLANDVFTRGDSTAITQFRQLLGADKIVSQKTGRAIGITKGGGEALFNAAKARWMFNSFYRAFDSASSPAGRTMIDEIMNDATVKTGINGTVDVMEAMVNKGDVLDPVLDFSVDKVRLGNGVFDATKIKFSPKDTSGFNINKFLRELGIADPTDDVAKKKLISILGGPAQSKEFEKFLTYMKAVSDTPIADTSTFMQRRLQLGGLNSFTGAVVLGGSAAVNPLAPALFILLGRRAGQILTDPIAMRAFNDALNPEEQIALLTGKKVGDGVPGVLGIGRRYFKGRDIQTAANILKSPGVVGRLGLTQKREAFARLLNYLNENDVDVPKINAKDITPEQITERMQQLDASVPAPIYDEKTIPKNTYETLFAQDFSGTSGDLQTDNNAVTFLSTATQKEAEVEAEEAPIEQQEKQLVMEDLQLEDPVASAPAAPTPPNTGQVTSQQVAD |
⦗Top⦘ |