Scaffold HEA_1008745

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold HEA_1008745

Scaffold HEA_1008745

Overview

Basic Information
Taxon OID	3300002879 Open in IMG/M
Scaffold ID	HEA_1008745 Open in IMG/M
Source Dataset Name	Assembled contigs of human gut microbial metagenome from Inflammatory Bowel Disease and Treatment (7 pooled healthy)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Harvard University
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	819
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Bacillus → Bacillus subtilis group → Bacillus atrophaeus	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Healthy Individuals And Crohn's Disease Patients At Harvard School Of Public Health

Source Dataset Sampling Location
Location Name	Harvard School of Public Health, Boston, MA
Coordinates	Lat. (^o)	42.335579	Long. (^o)	-71.102733	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F074964	Metagenome	119	N

Sequences

Protein ID	Family	RBS	Sequence
HEA_10087451	F074964	N/A	MITKKNVNKLQNAVIKESASNLVGAVKLYNALFANGADLKAICKTLEIPAEYAIRVATLAKDKKRLVAVCSQMLPKVGDTFVKFSLYSKVYKDNKVDKEKGIEAKTADWCAENVIYGGEYKSFGFSTAETLETKKSAKWLVKETDEYKATYVAVKIKSYSIRTIAKCVSEYLTHESNQQ*

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