Scaffold Ga0068302_10148401

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0068302_10148401

Scaffold Ga0068302_10148401

Overview

Basic Information
Taxon OID	3300005071 Open in IMG/M
Scaffold ID	Ga0068302_10148401 Open in IMG/M
Source Dataset Name	Porotermes gut microbial communities from Mount Glorious, Queensland, Australia - TN01
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Queensland
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	916
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Porotermes Gut → Termite Gut Microbial Communities From Australia

Source Dataset Sampling Location
Location Name	Mount Glorious, Queensland, Australia
Coordinates	Lat. (^o)	-27.330504	Long. (^o)	152.763993	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000322	Metagenome	1302	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068302_101484011	F000322	AGGTGG	VARMGEERKVYRVLVGKPEGKRPLGRPRRRWENGIRMDLRKIGWGSVE

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