Scaffold Ga0068304_1170117

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0068304_1170117

Scaffold Ga0068304_1170117

Overview

Basic Information
Taxon OID	3300005079 Open in IMG/M
Scaffold ID	Ga0068304_1170117 Open in IMG/M
Source Dataset Name	Mastotermes darwiniensis gut microbial communities from Townsville, Australia - TV02
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Queensland
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1052
Total Scaffold Genes	4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Mastotermes Gut → Termite Gut Microbial Communities From Australia

Source Dataset Sampling Location
Location Name	Townsville, Australia
Coordinates	Lat. (^o)	-19.280075	Long. (^o)	146.824457	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F004326	Metagenome	443	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068304_11701171	F004326	GGA	MPKQFPHSLDEKLVDKEQFYQWLKFGDIKGETESTMVAQDQALSTKCIKKKF*

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