Basic Information | |
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Taxon OID | 3300005487 Open in IMG/M |
Scaffold ID | Ga0074211_122462 Open in IMG/M |
Source Dataset Name | Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichment |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Finished |
Scaffold Components | |
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Scaffold Length (bps) | 870 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment → Sediment Methylotrophic Communities From Lake Washington, Seattle, Washington, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Lake Washington, Seattle | |||||||
Coordinates | Lat. (o) | 47.63458 | Long. (o) | -122.26655 | Alt. (m) | Depth (m) | 63 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F021517 | Metagenome / Metatranscriptome | 218 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0074211_1224621 | F021517 | N/A | MKLKHLLENSTEHAYTPLTVYEKKNMVETIKSYNEYRKGLKADGVYETAQKIMEAVNLAERYALKECGDWMEAKMVERDMKEIKRDAAKMYEEAQKMKAIEKQLEMLYEEVGRRLERYFEIADQVNEAPQAYQTQGQPSSVSIASLG* |
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