Basic Information | |
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Taxon OID | 3300005504 Open in IMG/M |
Scaffold ID | Ga0074230_1431775 Open in IMG/M |
Source Dataset Name | Poplar biomass bioreactor microbial communities from Brookhaven National Lab, NY - total biomass decay community |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 525 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Engineered → Solid Waste → Wood → Composting → Bioreactor → Poplar Biomass Bioreactor → Poplar Biomass Bioreactor Microbial Communities From Brookhaven National Lab, Ny |
Source Dataset Sampling Location | ||||||||
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Location Name | Upton, NY | |||||||
Coordinates | Lat. (o) | 40.869444 | Long. (o) | -72.886667 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F046796 | Metagenome / Metatranscriptome | 150 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0074230_14317752 | F046796 | N/A | HVEQMYYLLEDPATQELMKDVVVGMAVQNGVAVPDGNKGESGEKHYVGMQRVREFVARVPAGQTFTVHDIFNLTIEHMPSTPKIRHPEFEKQRKASISLALTSMVKGGDLEVAKQGRGRECTVYRKPEAS* |
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