Scaffold Ga0073904_10491809

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0073904_10491809

Scaffold Ga0073904_10491809

Overview

Basic Information
Taxon OID	3300005660 Open in IMG/M
Scaffold ID	Ga0073904_10491809 Open in IMG/M
Source Dataset Name	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitate
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	677
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Proteobacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Source Dataset Sampling Location
Location Name	Austria: Klosterneuburg
Coordinates	Lat. (^o)	48.3	Long. (^o)	16.2	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F071915	Metagenome / Metatranscriptome	121	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0073904_104918091	F071915	N/A	RARMELGHMSELTEAMLTRVQSAFVSRDLSELSQQYEQVVVLREAVMAYLQRVGRGELSDAEADELAHLVTAAGEITHLSAAISRDLAPLARALKEVNITPSPETAQLLGQLFQKVQAAAHGALLALLNGDERAAQGVLASRGAVLEMTTELNRLQSAKLAQDDPDRLLKHRVQFEILDKLRRIYSLAENMAIAALPRGALAAEFGG*

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