Basic Information | |
---|---|
Taxon OID | 3300006174 Open in IMG/M |
Scaffold ID | Ga0075014_100641672 Open in IMG/M |
Source Dataset Name | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 612 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Curtissbacteria → Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9 | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds → Freshwater And Sediment Microbial Communities From Various Areas In North America, Analyzing Microbe Dynamics In Response To Fracking |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Pennsylvania, USA | |||||||
Coordinates | Lat. (o) | 41.1752 | Long. (o) | -78.4168 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F099906 | Metagenome | 103 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0075014_1006416721 | F099906 | N/A | MQRLEKWSVIGAALVTIVGFPLLLVSLWFAYRVDAVISEQLGEIKKIAQSENSIALNTMVFNDPSNAGIINAIQNDKPILVENGGSYSDVEPDKYLGAFDAIELVYRDGFLSDDHLCSLFSFYIKEANKMRRLRRTLRSILISSAASANLLPLV |
⦗Top⦘ |