Basic Information | |
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Taxon OID | 3300006734 Open in IMG/M |
Scaffold ID | Ga0098073_1024621 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 878 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Gulf of Mexico | |||||||
Coordinates | Lat. (o) | 28.867 | Long. (o) | -90.467 | Alt. (m) | Depth (m) | 5 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F006619 | Metagenome / Metatranscriptome | 368 | Y |
F038646 | Metagenome | 165 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0098073_10246211 | F006619 | N/A | DVPAVTPEPYCSCGSFQRQLLNVSEFQAEIQGFKPWCIHLSWFGKYRELLCKRTDARNASPSGTPEKCVAWWYQPPADSLSDGRFVLLYTNNGAQAPLSHWRYYKPKEVFTQHHAWDLFFNMMEAGYVPFPGVSLPQLKSAIKK* |
Ga0098073_10246212 | F038646 | N/A | MTDDILDYARQLVANQPMKLREHHNYHLEIPDDLHWELVRLGAELKMDYEVYAEEVLKMHAEEAISRRITAKAYNDPSWVTKLKLDCIDEPDDTMTIHIEWDEKDPDLQYWTNLGPKGQEDFILTALRSACDSVLSDHDN* |
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