Basic Information | |
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Taxon OID | 3300006790 Open in IMG/M |
Scaffold ID | Ga0098074_1063177 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1018 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean: Gulf of Mexico | |||||||
Coordinates | Lat. (o) | 28.867 | Long. (o) | -90.467 | Alt. (m) | Depth (m) | 18 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F016661 | Metagenome | 245 | Y |
F095309 | Metagenome | 105 | N |
F097118 | Metagenome | 104 | N |
Protein ID | Family | RBS | Sequence |
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Ga0098074_10631771 | F097118 | N/A | KFGKGEDSLVDSLFTGDSTNDGWYTVTGRKYKTMRFFTGNGKPLFYIVSNKHGITSGSLSKLNGEFFYSHGFSSIDEKRLGLADTLYNRKKQIFEQIIKAV* |
Ga0098074_10631773 | F016661 | GGAG | MNYNAERYLALKMFEREQQRDKIRAVLWNVSITSIYAMVVIQVFRGFIL* |
Ga0098074_10631774 | F095309 | GAGG | MSYSEYRRKLRKLSAKYNEAYKRYGWGADTTRKLRQKKIDLRAKYAVHSFDYAVESLTSKGIL* |
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