Basic Information | |
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Taxon OID | 3300007740 Open in IMG/M |
Scaffold ID | Ga0104326_129261 Open in IMG/M |
Source Dataset Name | Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 Soapdenovo |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Princeton University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2398 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Permafrost Core Soil Microbial Communities From Svalbard, Norway |
Source Dataset Sampling Location | ||||||||
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Location Name | svalbard,norway | |||||||
Coordinates | Lat. (o) | 78.11096 | Long. (o) | 15.55294 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F081100 | Metagenome / Metatranscriptome | 114 | N |
Protein ID | Family | RBS | Sequence |
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Ga0104326_1292612 | F081100 | AGG | MARIVPANKSIRKGVDEDEYANAGTTENLLELRERVQGTAEKDLGAAGRTGT* |
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