Basic Information | |
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Taxon OID | 3300009965 Open in IMG/M |
Scaffold ID | Ga0133741_100035 Open in IMG/M |
Source Dataset Name | Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 7 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Autonomous University of Barcelona |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 31136 |
Total Scaffold Genes | 40 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 35 (87.50%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity → Human Saliva Viral Communities From Oral Cavities Of Healthy Adults From Alicante,Spain |
Source Dataset Sampling Location | ||||||||
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Location Name | Alicante,Spain | |||||||
Coordinates | Lat. (o) | 38.3852246 | Long. (o) | -0.5132249 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F076191 | Metagenome | 118 | N |
F105376 | Metagenome | 100 | N |
Protein ID | Family | RBS | Sequence |
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Ga0133741_10003519 | F076191 | AGAAGG | MKIIAENPAEEALLWRIKALSDELVNQDNRSTNMPMWTILDNNKAGKDYGAVMYFTGKAAEQHINENDHHYKKPMICVRSAHDNRELKDVIHLLILAGENEIPSNHYGVLRDA* |
Ga0133741_10003537 | F105376 | AGGAGG | MNKDKKGENMEPEVSAKEFGALEADVRHIKEGVDKHTITLERIENIARANVTQAQLKAYIAEHEKESEEKYVKRTEIEGVMNFWSLVTSNLAKLFAIALVGLAIYATNNLIQQNKAVTELQEEVQQTQVRRK* |
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