Basic Information | |
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Taxon OID | 3300010934 Open in IMG/M |
Scaffold ID | Ga0137844_1001018 Open in IMG/M |
Source Dataset Name | Microbial mat microbial communities from the Kallisti Limnes subsea pool, Santorini, Greece - 2-BIOTECH-ROV9-P3 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Hellenic Centre for Marine Research (HCMR) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 8762 |
Total Scaffold Genes | 15 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 10 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Subsea Pool Microbial Mat → Kallisti Limnes Metagenome Study |
Source Dataset Sampling Location | ||||||||
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Location Name | Santorini, Greece | |||||||
Coordinates | Lat. (o) | 36.4542567 | Long. (o) | 25.40523 | Alt. (m) | Depth (m) | 229 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F034704 | Metagenome / Metatranscriptome | 174 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0137844_100101815 | F034704 | N/A | PPYVNLELYNEMTPWNNDAEFYRDFFIPMWEKSLKHIKEGGKVCFNISPKMYDAALSYGLEPCDIEENLLQQLGKQHKTKKQDKIYIWSKXNSXISEH* |
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