Basic Information | |
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Taxon OID | 3300011129 Open in IMG/M |
Scaffold ID | Ga0151672_166585 Open in IMG/M |
Source Dataset Name | Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Toyama Prefectural University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 694 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomonadales → Hyphomonadaceae → Henriciella → unclassified Henriciella → Henriciella sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Marine → Environmental Dna From Seawater And Marine Sediment |
Source Dataset Sampling Location | ||||||||
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Location Name | Japan Sea near Toyama Prefecture, JAPAN | |||||||
Coordinates | Lat. (o) | 37.36555 | Long. (o) | 137.72861 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F078585 | Metagenome | 116 | N |
Protein ID | Family | RBS | Sequence |
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Ga0151672_1665852 | F078585 | AGGAG | MSRYEDCGSYDYSDYCEGKGYYESYTEKPFDEDEASLRRIEAREEAEREAKLYPPIGKHEMQERIKEVKTRLGAKYND* |
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