Scaffold Ga0153698

Basic Information
Taxon OID	3300011335 Open in IMG/M
Scaffold ID	Ga0153698_1548 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Basic Information

Taxon OID

3300011335 Open in IMG/M

Scaffold ID

Ga0153698_1548 Open in IMG/M

Source Dataset Name

Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Chunlab, Inc

Sequencing Status

Finished

Scaffold Components
Scaffold Length (bps)	15411
Total Scaffold Genes	27 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	18 (66.67%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (50.00%)
Associated Families	6

Scaffold Components

Scaffold Length (bps)

15411

Total Scaffold Genes

27 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

18 (66.67%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (50.00%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Hwacheon, Gangwon-do, South Korea
Coordinates	Lat. (^o)	38.0874861	Long. (^o)	127.761456	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Hwacheon, Gangwon-do, South Korea

Coordinates

Lat. (^o)

38.0874861

Long. (^o)

127.761456

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F009679	Metagenome / Metatranscriptome	314	Y
F026507	Metagenome	197	N
F029096	Metagenome	189	Y
F031795	Metagenome	181	N
F038217	Metagenome	166	Y
F044983	Metagenome	153	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0153698_15481	F038217	N/A	MTQNKPEQPDNKPMSCYLSLNSAIGVANWIAPTDVAALTLARRLAMALDTAFDMGELKEATPLAAKYLQVLQQLHLTVETRTQGKQGEENDGTNHVGNYLRLLETKDSKQKPKPANGRASGGRAR*
Ga0153698_154811	F031795	N/A	VTAYTPYPKVFIAGTQYSDTALSSIGINLGRRDIYEQAQPGIGNVQLWSSADTLLPVNLSDEVEVQIADSTGTYRTIYVGIISDIDITLDGYGNVGSIARYNITAVGPLALLNKHTTGAVNYAKEFDGTRILNILSDAFLQDWTEVVPTLTWAAVSNIATWQNWDGTNITLVNNLIADIDTPGTYELAAYTDGLTNALELAQSAAQSGRGFLYEAPDGSIHYDSYGARAAYVPLTLTENDLLAGGLRQAAQWSEIVNDVTVTTYNGTEAFAADYTSQQSYGQLAGSRATTLHNSADADIQALAFLESRAFPRTYPEELTIPLHSPTVSNATRDALMLMSVGSAIYTQDLPTVFGTVFDGFVEGMKWNLTRYTADLTLVCSALSETYPHKVWLQIAPTVTWASYTPSTEEWMDL*
Ga0153698_154821	F026507	N/A	MVEGITLAKESQLNWHNEAVICIRNFARTGKPFTAEDVVAEIGAPSGSGKVIGAAFNTVARSNMIWRCGERPADRKSSHRRMLAVWRGGQVTEQTRLWND*
Ga0153698_154823	F044983	GAG	MSDEVWQSIERKIQGHRAAAQHLPTSCPECANILEPVDLGVDIDTNERLWVTHCCGVWEKYLEKISEQQLP*
Ga0153698_15485	F009679	AGGA	MALIVLAELKSVLGIGDIYADAIVQECADAAENVLLSYLIFDDVAIKGVSLTSNVARFYCYENTFVVGQALTVSKCGAPFDGSRTVSKVGYDEYGVTYFEAAITNADITKRMVIPNGRAVLTSQASLYDSGYPEAKEAAMAIACDIWITRTGTLGQSGVDFQSPAPYRLGRSMLTRVSGLLGKHLDTRGYLG*
Ga0153698_15489	F029096	GGA	MDMASQKITIKPDLSDYRGLLKAISQMDKDSQTALKGDVQSISAWTAGGMAKAAYGAPMSKQAVIVAGSIKSNKDRVPNISIGGSKGRASGGANAGQLLFGNEFGVDRNRKGSRGSFPNGGFKFPDRSPSQGRGNAGYWIFPTLKEMQPEIRKRWLDAVIKVMDNWARTS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153698_1548

Overview

Ecosystem & Geography

Associated Families

Sequences