Basic Information | |
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Taxon OID | 3300012006 Open in IMG/M |
Scaffold ID | Ga0119955_1018766 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Georgia Institute of Technology |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2442 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (50.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Lake Lanier In Georgia, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Georgia | |||||||
Coordinates | Lat. (o) | 34.21 | Long. (o) | -83.96 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F041650 | Metagenome | 159 | N |
F091376 | Metagenome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0119955_10187664 | F041650 | N/A | MREDIQLSLTEVQMPRTRYQLEHFVIGAHDTPEMQFVQVCRELEALHYTIKEVALQVRKTEYEIEDLREKGDRISQVEADIKELGLERTRLVAIGAVREYDTLVEIYDSIPHFTREQIDASQPDYWQARLGRQANLQVMSGSANWAHLEALDQIGVLQPMIEAQQAKAKELQQ* |
Ga0119955_10187665 | F091376 | AGGAG | MKYATWIISRPEGSTPEPLIRSRGGQASGGLMLDSETVLGYVWNDVDLSGLDKWNFVEKTYVQALELAQAVNPECFFGDDGTIQAPQVELP* |
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