Scaffold Ga0157210

Basic Information
Taxon OID	3300012665 Open in IMG/M
Scaffold ID	Ga0157210_1000401 Open in IMG/M
Source Dataset Name	Freshwater microbial communities from Talbot River, Ontario, Canada - S11
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Molecular Research LP (MR DNA)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300012665 Open in IMG/M

Scaffold ID

Ga0157210_1000401 Open in IMG/M

Source Dataset Name

Freshwater microbial communities from Talbot River, Ontario, Canada - S11

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Molecular Research LP (MR DNA)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	19038
Total Scaffold Genes	28 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (21.43%)
Novel Protein Genes	9 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (22.22%)
Associated Families	9

Scaffold Components

Scaffold Length (bps)

19038

Total Scaffold Genes

28 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

6 (21.43%)

Novel Protein Genes

9 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (22.22%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada

Source Dataset Sampling Location
Location Name	Douro-Dummer, Ontario
Coordinates	Lat. (^o)	44.4982	Long. (^o)	-79.1546	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Douro-Dummer, Ontario

Coordinates

Lat. (^o)

44.4982

Long. (^o)

-79.1546

Alt. (m)

Depth (m)

Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002778	Metagenome / Metatranscriptome	530	N
F003786	Metagenome / Metatranscriptome	468	N
F008078	Metagenome / Metatranscriptome	339	Y
F009808	Metagenome	312	N
F019647	Metagenome / Metatranscriptome	228	N
F052594	Metagenome / Metatranscriptome	142	N
F054865	Metagenome / Metatranscriptome	139	N
F090393	Metagenome	108	N
F103247	Metagenome / Metatranscriptome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0157210_100040110	F052594	GGA	MATKYYGMDKNQVALCEAMVTKYPKGIKTNNVVSSASTLVSFYNSKDEKNKRFYEYMNPERMVSLLWQVINIKNEKEDVKEAAVRIINKLLLNIVVN*
Ga0157210_100040112	F009808	N/A	MKKNFNNQNFEWLFQDITSSMPKIIFTGIILTYLITAALNVYFLPLPLILSIPASLMLQFGRFAVVFIDFLNPSDKRSKYPPRVAAIATVIALLELWFSIQGQTTGTEFWAMFFFIGAIICFGYVLEIQFIEKGIEAYGIGVKEPRTRRRVVREVTKTNISSTQPIKFTMAVCFILAVIYLPAQNNHFFAYNTMSLEKIDNGLLERRYYSEADDSYTIDTITYDLLSGIDLWDGYSRTTYDNTMFMTYGTQNFEYFPLAGIWKYKNKYYDYIGLLKFVSKYVKRNFLNKKINYGKIRRH*
Ga0157210_100040113	F054865	N/A	MEVKTNRFIIKYKEGIVSVAANDVAEAIERFKELRIETSAKELTIVPADEMYKRREEIFQKE*
Ga0157210_100040117	F002778	N/A	VKEYNAQMMEIKAFCDEVNAWISTAPSAEHLEECDEYLRQLSAYYSRYTVISGMNESIYSQLLMICIRDMAEEEYKRIKHSSTLTDYYVKGKYPKATAIFEQCRAVKQLLLITSDNYRTLLSSFRQERILVGHMTT*
Ga0157210_100040119	F090393	N/A	MALERKTHFNVSFYDYEQDKIQTWGLTGSSRLALLVHTIAFQKDKIEANKINKEEIIKSALDYLIHDLKKFLETPYITEDNA*
Ga0157210_100040120	F019647	AGAAG	MKIVKGVVKYGAGAPREGQYGPSINILVTLEDQSQVRVYGKPGDVIERYKSGQNIQLIDDKGKYKVVEDEPQTMPAPTGVAVIDQQSEKPDLAAMVFEMSAIYSQAYIDIYNKISEAGVPHESATAATSTIFIQVFQKLR*
Ga0157210_100040123	F003786	N/A	MEQKDAYKQTLNVISSVFPMYGIDGDLAFYANIAKEIVKTFGQIAANEIEIAFRMFSAETLELDDDVKFYGKANMHTIGKILNGYMTYRRKIIASHDNEVAALRHQVQMEERGRLEREKLYAEFPTMIKEFTGKTWEEVPLYWYDMCLKFDMITYEEGEKRALWEEAQAIALKEPPESLDLMTIRSHAKKIEQGNMKRAVVIAQKLAVWRKVIKK*
Ga0157210_100040124	F008078	N/A	MKQTPKEKAKELFNHYYILIQDIGGELGQEILVSILAKHCALFAAREVLQDKWNTEDYDQYHYWEEVEHEIENYEE*
Ga0157210_10004014	F103247	N/A	MGYTEKTVLLRGLNFDSGRTSNRSAGGVAGTGSINPTNSEPTTQNNSVTKVFTEEFLDSYTAILTVTKNGGVLPGVTQQILVFQNGQLLVDSQYSVAGSNITIDSVTHYDGSNYIIFFIII*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0157210_1000401

Overview

Ecosystem & Geography

Associated Families

Sequences