Basic Information | |
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Taxon OID | 3300012665 Open in IMG/M |
Scaffold ID | Ga0157210_1000679 Open in IMG/M |
Source Dataset Name | Freshwater microbial communities from Talbot River, Ontario, Canada - S11 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Molecular Research LP (MR DNA) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 12702 |
Total Scaffold Genes | 16 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 14 (87.50%) |
Novel Protein Genes | 4 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 4 (100.00%) |
Associated Families | 4 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Freshwater Microbial Communities From Rivers And Streams Along An Organic Matter Gradient Associated With Agriculture In Ontario, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Douro-Dummer, Ontario | |||||||
Coordinates | Lat. (o) | 44.4982 | Long. (o) | -79.1546 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F001915 | Metagenome / Metatranscriptome | 617 | Y |
F003521 | Metagenome / Metatranscriptome | 481 | Y |
F004695 | Metagenome | 427 | Y |
F098944 | Metagenome | 103 | N |
Protein ID | Family | RBS | Sequence |
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Ga0157210_100067915 | F098944 | AGG | MFDEIRPEGSTVTSEEIKKKAREYAKARRAQSKAMKLATGQIEPKAIETVPVVDEFDMSSFTPRSQLKAGRPKSIVNKVTEYGALFNKLNDERTSRGLPPLKTAMEVLIDAMQSDELDIKDKAKIADKLAPFESSRAPIISVEHIQNVTREDEGDAEDALKDFMESLRKV* |
Ga0157210_100067916 | F001915 | AGGA | MEWTLAHPLHDVDDIVDMADSVFGHEADGILTRDKAVFRKNVTIATTVQVFDKSKEFIAVCRGDKLVRTFIGDAAEDTLLAYCWFDRGGYTTYANEEISNAKFHHVDLSLSPRLRVRLINEMIDQHILWANRWDIPVVCSTSIRAEHDGFMKIHKKRGFTVHGSYAWLRTEKGIECLTK* |
Ga0157210_10006797 | F003521 | AGGA | MKSLVLNIRDYFNRRTKVIDSHKEAHVTRKTLVIENGECAKRLLGNDDFALLFNLYRFYLLEMLEDSKDDVNRIDNAQRVAGVRDFIEFIERTEYLGKVANKNVETLTK* |
Ga0157210_10006798 | F004695 | AGGA | MLDKQNVIVENLASSSGNRGLTEQVCHEVYVKMVDYLRLTQSKNTYNRFTDYHYLNIPVSNSTEPIRGIDYIQPIVAPGIDYATAVITKCLMPNGKINFEFERFSEMDGDQARQATEMVKYMLNSKNDSYQVIRDWAQDSLLHKNGIVMVSPVRSPITQYKEVEGTRDQLRVFETLAGDKGLTAKRQNMRKVDVDLQGAMQEAMAPDETMQEPTGDELQEALRNNTIYRAKYKLTGYETSIRVKHVAQHYFVCNPTINTIQDQDFVGFYDPMTIHECKAQFPFVDLELLADHAAYGPAGAYQAGALENDLALHARDSTPVPGQGVIASQGADRYSRVIMLTTAWLRRDIDNDGEEEIVECCFSGSYILYAKEVDFIPLANMCPKPITGNFFGYSLGERLVPLQEYATAIRRAEMSFAMQSSTPRIGVNPEFLDAEEIQRGVSAMFILDRKFDPTKHIFEFQPMQGNLAYVESAMNRFESDKMAMIGMTSPGDTLNPEVMKDGNSGFKLQLAMGPNQLIQDEMVKNCAIGLRDVIYITWKTLIQYSDDFNIQQLAGTCLKGAPFMDAISIENFEFIDRRMINIDLALGFLSEENRLTRQQMILQAQQQFGQAMMQIPPEVPEMFIKIRRPFEDTLRVLGVKDVDAYLPTMEEAVKIMQAQAAKGPSAEQQETQSKVALNNAKAEESGSVTALNIRKAQDIDTDDMFEALAAKRGELSSVQVD* |
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