Scaffold Ga0157362_1014490

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0157362_1014490

Scaffold Ga0157362_1014490

Overview

Basic Information
Taxon OID	3300012998 Open in IMG/M
Scaffold ID	Ga0157362_1014490 Open in IMG/M
Source Dataset Name	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	4759
Total Scaffold Genes	7 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (57.14%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Boletales → Coniophorineae → Serpulaceae → Serpula → Serpula lacrymans	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden → Characterization Of Biomass-Degrading Enzymes From Insect-Associated, Soil, And Chicken Feces Microbial Communities

Source Dataset Sampling Location
Location Name	Brazil: Ribeirao Preto, State of Sao Paulo
Coordinates	Lat. (^o)	-21.166	Long. (^o)	-47.848	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F076690	Metagenome	117	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0157362_10144901	F076690	N/A	MGNYSKIKRIVPLRSRLVTAVGGNQKVGEWECIGEVRERTRKLKREVVGRLDEGDAYENKTAQDRCLCLRSVKMPKV*

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