Basic Information | |
---|---|
Taxon OID | 3300013004 Open in IMG/M |
Scaffold ID | Ga0164293_10282622 Open in IMG/M |
Source Dataset Name | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 1157 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Oligotrophic, Dystrophic, And Eutrophic Lakes In Wisonsin, Usa |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: Wisconsin | |||||||
Coordinates | Lat. (o) | 43.099 | Long. (o) | -89.405 | Alt. (m) | Depth (m) | 7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F053255 | Metagenome / Metatranscriptome | 141 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0164293_102826221 | F053255 | N/A | MYAAHHSDPSDPDVIIKLDISNAFNALCRQLTLDVLGGQATSDYECGLKEGDNIDTCCGELRNMFENIEAMRTTKSHLRYFDYCGNVLDAWGKTGGQQGEPLEMIVFCLTVHHLWGRTLATHNQDACAVAYADDGYIKAKLSVALEVLSDIKQVLKEDAGLALNDKTKILVKGISAADAHAAAQRLLIADPSLAHLSPLLTPASFVVDGYIGLGVPIGTDAFIQHFVKDKCQVIMEDVDKLDNIQDGFIHYQLMRFCQATRLQYLNGHVQLVNQNALQQQHVDHKITNALLKKGTRDAYKTWNQQDSA* |
⦗Top⦘ |