Basic Information | |
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Taxon OID | 3300013121 Open in IMG/M |
Scaffold ID | Ga0172278_1063 Open in IMG/M |
Source Dataset Name | Activated sludge microbial communities from Jimei wastewater treatment plant (WWTP), Xiamen City, Fujian province, China |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Novogene Bioinformatics Technology Co., Ltd |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 101483 |
Total Scaffold Genes | 68 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 39 (57.35%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Communities From Jimei Wastewater Treatment Plant (Wwtp), Xiamen City, Fujian Province, China |
Source Dataset Sampling Location | ||||||||
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Location Name | Jimei WWTP, Xiamen City, Fujian province | |||||||
Coordinates | Lat. (o) | 24.25 | Long. (o) | 117.57 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F002465 | Metagenome / Metatranscriptome | 557 | Y |
F006066 | Metagenome / Metatranscriptome | 382 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0172278_106354 | F002465 | GGAG | MPTSKPPKPDPNQELTERRIAEFAVEESRLSAVAYRFQLVPRERVWKNWDRTEFEPNHFQVVGLAGVCLNRDEIEKAERIASRALEEVDGILFTVEDPADSIVVRGVTGTMEFVRTPTLCAEIMAGSTGAFDRALAALGAAFPGDRVAGKIVSESK* |
Ga0172278_106364 | F006066 | N/A | MRRRPGEAPPTHRVWLSNEQPMREGPSPDGRQYFRIRFDNEPSPEWMRAYRAGLLGLMPEDRDAVLRFEFQGDSVRFVAADAEVAKLRRVLEQRVQAVNGILSGGRAVEP* |
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