Scaffold Ga0167632_1010900

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0167632_1010900

Scaffold Ga0167632_1010900

Overview

Basic Information
Taxon OID	3300015085 Open in IMG/M
Scaffold ID	Ga0167632_1010900 Open in IMG/M
Source Dataset Name	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Bristol
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1282
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil → Metagenomes Of Arctic Soils

Source Dataset Sampling Location
Location Name	Russell glacier, Kangerlussuaq, Greenland
Coordinates	Lat. (^o)	67.156805	Long. (^o)	-50.082499	Alt. (m)		Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003649	Metagenome	475	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0167632_10109002	F003649	GGA	MLRTLIREASAEGSLTAGLAGDTPQAIAFFAKLKRALVHGYFAEEDPASGRVESVAVPGYVFWPDDRHSGNPPVGFGLFRALNGGYELW

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