Basic Information | |
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Taxon OID | 3300019360 Open in IMG/M |
Scaffold ID | Ga0187894_10114638 Open in IMG/M |
Source Dataset Name | White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1417 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Hawaii | |||||||
Coordinates | Lat. (o) | 19.2894 | Long. (o) | -155.8119 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F011210 | Metagenome / Metatranscriptome | 293 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0187894_101146382 | F011210 | N/A | MIRHYVARGLQLLGLIVTGEALLNYFGDMGGLMTVATLGAGLFYIGWVVQPRKGS |
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