Basic Information | |
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Taxon OID | 3300020391 Open in IMG/M |
Scaffold ID | Ga0211675_10008269 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5836 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_096 | |||||||
Coordinates | Lat. (o) | -29.6749 | Long. (o) | -101.2137 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F051480 | Metagenome / Metatranscriptome | 144 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0211675_100082693 | F051480 | N/A | MENWCRLGCSKFFRGLIASRQPEEIIKLVERYNKDHDKTESNYIDIVIRSEGSFSYQDIMTMPVNSIRLLVERMNNRIEELNKQSKQASGRR |
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