Basic Information | |
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Taxon OID | 3300020399 Open in IMG/M |
Scaffold ID | Ga0211623_10131165 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 870 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_068 | |||||||
Coordinates | Lat. (o) | -31.056 | Long. (o) | 4.6606 | Alt. (m) | Depth (m) | 700 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F072766 | Metagenome | 121 | N |
Protein ID | Family | RBS | Sequence |
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Ga0211623_101311652 | F072766 | AGGAG | MSFKSLRVAGTVTATQTADDAAHHAVIGKLSPAASYRVTEFGGQDALFLISDDYPTASSSNAFYLKAGTTTTVVPNVERALRFASGVPVAQNSEDDTNANAILLETGTVDAPGFLLYDRAETEFRISVINETASSDCAVYVEEVAQGHPGA |
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