Basic Information | |
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Taxon OID | 3300025137 Open in IMG/M |
Scaffold ID | Ga0209336_10174800 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 548 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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unclassified Hyphomonas → Hyphomonas sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Pacific Ocean | |||||||
Coordinates | Lat. (o) | 49.2833 | Long. (o) | -134.6666 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F053977 | Metagenome | 140 | N |
Protein ID | Family | RBS | Sequence |
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Ga0209336_101748002 | F053977 | N/A | KKLVEDNIIKKTTIDHWLRSDHCFAYPTVQYWNLIKPYLKEIKFDYQMTFEIESDWE |
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