Basic Information | |
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Taxon OID | 3300025168 Open in IMG/M |
Scaffold ID | Ga0209337_1030556 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2993 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Pacific Ocean | |||||||
Coordinates | Lat. (o) | 49.5666 | Long. (o) | -138.6666 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F019575 | Metagenome / Metatranscriptome | 229 | Y |
F092877 | Metagenome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209337_10305563 | F019575 | N/A | MKYVIPSFQRSKILKEKTLKYLDEMKVDRRDVYVFIREDDNDWEGYASLSGINLETIDIKGIGATHNYITEHFEADEFIVEIDDDLENIVDNDRKPVEDFIGLCEEMKEKMDYVGCSYGGTYSVANPMFMSKCERYTTDLRYMLGCLRFRYIRKDIKVETNYAEDMENCILHFMRDKKILKNNWIAPKTKNYADGGCNGDGRGFESEKKDKAYLADKYPLYCRYFERKNGKPDCRIREYKNSTCRETFKQSPGIIKN |
Ga0209337_10305566 | F092877 | N/A | ETKESLPEYDEVIKITKNYIETASNDELDMKILLRIYTIYPIRLEAADLIFVKDHNEFRKLKKNPLTMNYVVVGQKKVLFSFSDYKTADTYGTVEIVVKDKLLKRLLQLKARITYNLTPMFNISRNTLSKNITTFFEKQGLKNISPTTLAKVIETHAYESIPAEARDKMKTLAEFRRHSLDTQAKFYIH |
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