Scaffold Ga0209476_10354568

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0209476_10354568

Scaffold Ga0209476_10354568

Overview

Basic Information
Taxon OID	3300027802 Open in IMG/M
Scaffold ID	Ga0209476_10354568 Open in IMG/M
Source Dataset Name	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_precipitate (SPAdes)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	627
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Source Dataset Sampling Location
Location Name	Austria: Klosterneuburg
Coordinates	Lat. (^o)	48.3	Long. (^o)	16.2	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F105443	Metagenome	100	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0209476_103545681	F105443	N/A	KPPVAPARASGLPIGAWLVLGFALVIGAFTAASVVSLRSTRGATTDLESMQRQFEPLSRSVRDLGDGVATFDRTVLAYLRAGTRDQHAATVASAERLSWAASRMADVGAGDEAPPVGPLLQRIAEHEAQGFALLRLQDARRRAVTDLESAYAALDRRVRSAGGSGVVIGDNLLARPSLAELARAVEAARHDVLSELTRGGNLSAGPNGG

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