Basic Information | |
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Taxon OID | 3300027815 Open in IMG/M |
Scaffold ID | Ga0209726_10000470 Open in IMG/M |
Source Dataset Name | Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 75731 |
Total Scaffold Genes | 101 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 70 (69.31%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater → Groundwater Microbial Communities From Coal-Tar-Waste-Contaminated Well In S. Glens Falls, New York, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | S. Glens Falls, New York, USA | |||||||
Coordinates | Lat. (o) | 43.292222 | Long. (o) | -73.604444 | Alt. (m) | Depth (m) | 5.4 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F094578 | Metagenome / Metatranscriptome | 106 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209726_1000047089 | F094578 | AGTAG | MESKERPKWPLHRLKSMYFAMHCWKCKKFELPIEKYKRLCENNIQKMIDNLEVKEMKFKEFNTIIKNSIFCKFEKRDFSNNCPICKKLGCR |
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