Basic Information | |
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Taxon OID | 3300028883 Open in IMG/M |
Scaffold ID | Ga0272443_10261487 Open in IMG/M |
Source Dataset Name | Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Acet-12 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 837 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment → Marine Sediment Archaeal Communities From Little Sippewissett Salt Marsh, Falmouth, Ma, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Falmouth, Massachusetts | |||||||
Coordinates | Lat. (o) | 41.5758 | Long. (o) | -70.6394 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F034916 | Metagenome | 173 | N |
Protein ID | Family | RBS | Sequence |
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Ga0272443_102614872 | F034916 | AGGA | MPAALPHKKAIANRIRKMIRDGVAMKDIMVSIQELQDAPSSFATFYKIYGQDIAQERADIVGMVGNKVVQQALEGDFKSQELFLRSKGGWSPNSTLNEQEQDEDPDMDESAIDTLMTLLGKSRDPSDNSE |
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