Basic Information | |
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Taxon OID | 3300030632 Open in IMG/M |
Scaffold ID | Ga0210250_11469949 Open in IMG/M |
Source Dataset Name | Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 814 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Quebec | |||||||
Coordinates | Lat. (o) | 47.2662 | Long. (o) | -71.2166 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F042911 | Metagenome / Metatranscriptome | 157 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0210250_114699491 | F042911 | AGG | MKIRAKVIASIAGSVALCLGVPGFAQQVTVDFTGGYSTTWGNSSGDYGAGIYSATINGAPSSSGIICDDFKDDITSGETWKANAYQASSLASGNLGNTMFGNTIGLTGYAEVATLVSMVFSGGSSYGGVTGISQAELASAIWYITAPGGIQGLDSKALALVKAVEAAFGSNTSAATKYLATLTNLWILTPANLGPGEPQEMWTEGLNVPEGGAAFMFLLLAGASCVGAMFIRYRQRMAVNELA |
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