Basic Information | |
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Taxon OID | 3300030633 Open in IMG/M |
Scaffold ID | Ga0247623_10332491 Open in IMG/M |
Source Dataset Name | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb12 (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 510 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
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Location Name | France: Rollainville | |||||||
Coordinates | Lat. (o) | 48.3625 | Long. (o) | 5.7397 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007076 | Metagenome / Metatranscriptome | 358 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0247623_103324911 | F007076 | N/A | WEISRYPNGRALTTAYRSALGNRADIRPSSGRCNARVWGGENVWNHGPGRPAGRFFCYFDGNDAVIVWTHERGDQPTHRDILVIAREGGSDHAGLTRWWGPLHHVIGKAG |
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