Scaffold Ga0315909

Basic Information
Taxon OID	3300031857 Open in IMG/M
Scaffold ID	Ga0315909_10001846 Open in IMG/M
Source Dataset Name	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300031857 Open in IMG/M

Scaffold ID

Ga0315909_10001846 Open in IMG/M

Source Dataset Name

Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

DOE Joint Genome Institute (JGI)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	27963
Total Scaffold Genes	38 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	7 (18.42%)
Novel Protein Genes	7 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	2 (28.57%)
Associated Families	7

Scaffold Components

Scaffold Length (bps)

27963

Total Scaffold Genes

38 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

7 (18.42%)

Novel Protein Genes

7 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

2 (28.57%)

Associated Families

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Taxonomy

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater → Freshwater Fungal Communities From Various Locations

Source Dataset Ecosystem

Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater → Freshwater Fungal Communities From Various Locations

Source Dataset Sampling Location
Location Name	USA: Lake Erie, Ohio
Coordinates	Lat. (^o)	41.7464	Long. (^o)	-83.3444	Alt. (m)	Depth (m)	0
Location on Map

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Source Dataset Sampling Location

Location Name

USA: Lake Erie, Ohio

Coordinates

Lat. (^o)

41.7464

Long. (^o)

-83.3444

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009003	Metagenome / Metatranscriptome	324	Y
F036096	Metagenome	170	Y
F037731	Metagenome	167	N
F043894	Metagenome	155	N
F062477	Metagenome	130	Y
F069698	Metagenome	123	N
F079655	Metagenome	115	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0315909_100018461	F009003	N/A	KAWQLYSNYFDIVENGKQEGNLVDAHMKAINAALYCVDEALTNAPNDIMQDFEGTGEYYSVKAYYHHVKNEILKLNEGKNIKVSRHAEAGTD
Ga0315909_1000184610	F037731	GAG	MAAKKQTNPKPNKVNLKGIRYKLELFDGFWSIPLAFLVFAISGTLSVAYFGDALISTEYIQYVVLAAMVMVVANFVVFLGIRFNFRALQREIYNKEVKYEINTYLTTWQKVVLYLLLYAFYFAAFLYILQMLLTATA
Ga0315909_100018463	F079655	N/A	MEQQNKKETAIRTLSKSLRRRFQGASVNISWVELDAFMMKAQTREMTNLINSYNEGYTDCKAGLPNKAENESNSNV
Ga0315909_1000184633	F043894	N/A	MRKHNQLNGLISRTVGSNAALLRAMRKSSTPISDRTLYNWLYDAKTIKLQQLINLSKALDIPVCELIKSITVKNEGDE
Ga0315909_100018464	F036096	AGCAG	MKATLTFDLTDDQHSFDCAINGKKYYDLVDEMRQHLRSLEKYQDLTEEQYQIVGKIREWLHSELLDAGIADKF
Ga0315909_100018467	F069698	N/A	MEFESRDVITIIGAVVSLTGLYYALKRDVVKVSSALGKVESYHKREVTMLAESIRETKDEFNNKLNVMKDEQNKAIDKLEAKIDVIASQNMTISNNLAELAGYIRGTK
Ga0315909_100018468	F062477	N/A	MKHITLLVLLLVMQIVGLGQRSASQTPYSKQGFTPELTTYDRQLFNLNFNSMMYWYETAQEIDSLYKMERAKVTYYAKITGIQAASYETLAEIYKNKKSIEKAISTEKDNEISQLKKRNRRLIISNTALTLGITGLAFSTIYFAIL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0315909_10001846

Overview

Ecosystem & Geography

Associated Families

Sequences