Basic Information | |
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Taxon OID | 3300032136 Open in IMG/M |
Scaffold ID | Ga0316201_11104171 Open in IMG/M |
Source Dataset Name | Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 665 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow → Sediment Chemolithoautotrophic Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Delaware | |||||||
Coordinates | Lat. (o) | 38.7869 | Long. (o) | -75.1074 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F012970 | Metagenome | 275 | N |
Protein ID | Family | RBS | Sequence |
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Ga0316201_111041712 | F012970 | AGG | MSDKTYNQQAAERVARRIPDGFGVDPMTVLVLLQTIIPAFLDCLNRNDDTDPDTVFQRVKTLYDKNPERLLRRTTRNCRAQSRREGTRLSYAQAEDMARAIILEAIGTEPEFGFALAREVEEID |
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